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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5739457_5739591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5739457 - 5739591

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATCAC

U12 Branch Point Sequence:

CCGGGTCCAACC

Flanking Amino Acid:

DVVADCSTAKSAVGAVHQTL

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

54.4

0.11

1.2

57.5

39.1

Major PPT

83.5

0.75

0.8

77.1

31.6

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

35.9

-1

37.98

40.9

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890