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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5741690_5742065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5741690 - 5742065

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTCCTGCTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAG

U12 Branch Point Sequence:

AGAGCTCCAGGC

Flanking Amino Acid:

PEFLIVLQCVVAGMNHLREN

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

39.8

-0.6

1.7

45.5

47.5

Major PPT

73.3

0.53

0.8

64.4

36.6

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

32.8

-1.3

1.9

35.28

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890