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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5743259_5743429_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5743259 - 5743429

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

TGCTTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CCGGGGTGACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

32.6

-1.2

2.4

43.2

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890