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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5753326_5755707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5753326 - 5755707

Intron Length:

2382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GGTTCTGTGACT

Flanking Amino Acid:

RPMDPEVIAQDIEATMNSAL

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

56.5

0.28

2.1

76.47

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255