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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5756036_5758118_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5756036 - 5758118

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

CTTGTATTGACT

Flanking Amino Acid:

VADIYLANINKQRKKPESGS

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.2

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

65.9

0.36

1.1

65.4

40.2

Minor 5ss

35.5

-1.6

2.9

42.3

38.1

Minor BPS

56.2

0.28

1.8

75.44

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255