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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5763218_5766374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5763218 - 5766374

Intron Length:

3157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGATAG

5'SS Class:

major

3'SS Sequence:

CCTTCTGCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

GTGTAAAGCACT

Flanking Amino Acid:

YSRSGNTEDYCESPHGERAS

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

61.5

39.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

74.3

0.55

0.8

69.2

31.4

Minor 5ss

36.4

-1.5

3.2

43.5

46.1

Minor BPS

36.8

-0.9

2.3

57.29

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255