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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5769110_5770939_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5769110 - 5770939

Intron Length:

1830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGGCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTTGCCT

Flanking Amino Acid:

VNDIKNAFERGEDPLAGDQN

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

49.7

-0

1.1

45.2

40.9

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

52.8

0.17

3.5

90.53

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255