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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5771018_5773018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5771018 - 5773018

Intron Length:

2001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCTTTCTTACTG

Flanking Amino Acid:

ESCIRFISRHGLQHEGIFRV

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.5

29.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

74.3

0.55

0.9

65.4

40.8

Minor 5ss

38.8

-1.3

2.9

49.9

46.4

Minor BPS

62.2

0.25

1.7

66.07

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255