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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5773080_5774087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5773080 - 5774087

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGCATTCTGACT

Flanking Amino Acid:

GRRSSTIRKQDSSQAIPLVV

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.3

0.55

68.8

41.9

Minor 5ss

33.8

-1.8

2.9

43.3

43.9

Minor BPS

47.7

-0

1.7

64.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014378

5752942 - 5827196

74255

ENSAPLT00000034730

5752942 - 5849506

96565