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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5775816_5778485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5775816 - 5778485

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CTCTCTCTAATA

Flanking Amino Acid:

HDLLQKTLGESQRTDCSLAS

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

76.7

0.6

0.9

72.2

32.5

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

58.6

0.26

1.7

67.2

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255