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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5783186_5784075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5783186 - 5784075

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTCATA

Flanking Amino Acid:

LSTLKIENEEVKKTMEATLQ

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.3

30.6

Major BPS

100

1.24

0.5

100

Major PPT

67.9

0.4

1.1

64.3

41.6

Minor 5ss

37.7

-1.4

46.2

49.1

Minor BPS

64.7

0.46

1.7

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255