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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5784178_5785890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5784178 - 5785890

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTTTA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

TTTTTCCTAACA

Flanking Amino Acid:

FEFQPHMGDMESQLCAQQPV

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

76.8

34.8

Major BPS

0.55

71.8

31.4

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

39.3

-1.2

2.8

46.9

42.8

Minor BPS

75.9

0.81

1.6

87.87

29.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255