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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5786116_5790788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5786116 - 5790788

Intron Length:

4673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CTTCGCTTATTC

Flanking Amino Acid:

YIHDLSDLIDQCCDLGYHAS

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.79

0.9

76.9

42.1

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

49.2

-0

63.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255