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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5790918_5791698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5790918 - 5791698

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCCA

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTCTTTTTAAAA

Flanking Amino Acid:

VKKIEKMKEKRQAKYTENRL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

56.2

42.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.5

0.75

0.7

81.7

30.3

Minor 5ss

-2.3

3.4

40.2

45.3

Minor BPS

63.1

0.41

1.4

67.32

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255