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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5795303_5808097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5795303 - 5808097

Intron Length:

12795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTTCCCCAATT

Flanking Amino Acid:

SEDSGRLFKKSKEVGLQLQE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.7

0.8

0.9

80.6

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

60.6

0.41

1.9

81.02

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255