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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5808261_5816911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5808261 - 5816911

Intron Length:

8651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

ACATCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCTATTTTACAT

Flanking Amino Acid:

KTRSTKDQQFKKDQNVLSPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

62.7

38.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

69.2

0.43

0.8

62.9

33.5

Minor 5ss

38.1

-1.3

3.7

53.9

45.1

Minor BPS

49.9

0.07

1.7

68.85

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034730

5752942 - 5849506

96565

ENSAPLT00000014378

5752942 - 5827196

74255