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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5856918_5857827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5856918 - 5857827

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TCTGTCTTACCT

Flanking Amino Acid:

VFGINRLDSSGVNVLLWGNL

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

66.1

0.4

31.5

Major PPT

73.7

0.53

0.9

66.9

34.2

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

62.6

0.47

1.8

78.66

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028035

5854507 - 5858773

4267