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Intron Name: Anas_platyrhynchos_platyrhynchos_27_590141_590342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

590141 - 590342

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTACTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

AATCACTTAAAA

Flanking Amino Acid:

ATSISILPVPRSCSGVLRFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

65.4

0.35

38.9

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

0.28

1.6

67.72

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042203

588119 - 605600

17482

ENSAPLT00000042114

588119 - 607528

19410