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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5923787_5924017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5923787 - 5924017

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTGCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAG

U12 Branch Point Sequence:

AAGCCCTGACCT

Flanking Amino Acid:

FLGGIHQMVPGTFAVISIIV

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

50.2

0.01

1.5

54.7

43.1

Major PPT

64.7

0.33

1.2

64.2

41.8

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

49.8

0.06

1.8

66.4

43.6

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978