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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5924713_5925285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5924713 - 5925285

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TTCCCTGTGATT

Flanking Amino Acid:

SYTGPLAIVYTFIDICKGLP

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

79.1

0.65

0.7

77.3

24.8

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

49.5

0.04

71.72

40.1

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978