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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5925909_5926178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5925909 - 5926178

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAC

U12 Branch Point Sequence:

GGTGCCCCAACC

Flanking Amino Acid:

NMPVVGKISMGFPAPTLPMV

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

44.9

-0.3

1.2

Major PPT

0.41

61.2

40.1

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

48.1

-0.1

61.44

43.2

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978