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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5928022_5929975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5928022 - 5929975

Intron Length:

1954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGCCAT

U12 Branch Point Sequence:

CCCAGCAGGACA

Flanking Amino Acid:

YLWKKSKLDCLVWLVSFLSA

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

60.2

39.4

Major BPS

53.4

0.08

1.4

64.2

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

29.4

-2.4

31.4

35.2

Minor BPS

37.2

-1

40.35

39.9

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978