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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5931720_5932393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5931720 - 5932393

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCCG

5'SS Class:

major

3'SS Sequence:

TGCCTTCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCTAC

U12 Branch Point Sequence:

GCGATTCTACCC

Flanking Amino Acid:

LPKFLLRQNKTLSLQELQKD

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.2

66.3

45.2

Major BPS

55.1

0.13

1.3

56.2

40.4

Major PPT

74.1

0.54

0.8

66.1

35.9

Minor 5ss

40.1

-1.1

2.8

51.2

45.2

Minor BPS

40.8

-0.7

1.8

43.35

38.3

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978