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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5932712_5932939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5932712 - 5932939

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTCTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTGTTATTAATA

Flanking Amino Acid:

DLMGTKALGKLCSSYQKIGI

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

76.5

38.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.8

0.63

0.8

68.8

37.2

Minor 5ss

33.2

-1.9

2.8

43.4

43.5

Minor BPS

61.6

0.36

1.6

68.77

37.7

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978