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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5933513_5934295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5933513 - 5934295

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTCCCTGCACA

Flanking Amino Acid:

EVVHPPILEERPNQTELSIY

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

81.6

33.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

70.3

0.46

0.9

64.4

36.6

Minor 5ss

49.4

-0

2.9

73.9

42.6

Minor BPS

55.3

0.16

71.01

40.5

Associated Gene:

Gene:

SLC26A9

Ensembl Gene ID:

ENSAPLG00000012289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012827

5921982 - 5934959

12978