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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5946095_5946803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5946095 - 5946803

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTACT

5'SS Class:

major

3'SS Sequence:

TGGTCTACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTATTCTTAATC

Flanking Amino Acid:

RIHSAEKATEVLEIVRNTVA

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

77.5

37.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

64.1

0.32

0.9

55.8

Minor 5ss

37.4

-1.4

52.9

43.6

Minor BPS

81.2

0.96

82.77

30.4

Associated Gene:

Gene:

PM20D1

Ensembl Gene ID:

ENSAPLG00000012225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026972

5938487 - 5947286

8800

ENSAPLT00000012740

5938241 - 5948700

10460

ENSAPLT00000044471

5938118 - 5948700

10583

ENSAPLT00000039962

5938118 - 5947286

9169