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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5968739_5970376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5968739 - 5970376

Intron Length:

1638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TGTGGCTGACGT

Flanking Amino Acid:

VFYMTAALLQVLILLYIADW

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

68.9

43.8

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

0.54

0.8

64.9

36.4

Minor 5ss

37.2

-1.4

47.5

Minor BPS

40.8

-0.6

2.3

60.99

48.3

Associated Gene:

Gene:

SLC41A1

Ensembl Gene ID:

ENSAPLG00000028285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045701

5963829 - 5970562

6734