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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5985496_5985959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5985496 - 5985959

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

CTTCTTGCAACA

Flanking Amino Acid:

MACMEFEMGKKKCERYWADL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

61.3

0.28

30.6

Major PPT

73.6

0.53

0.9

69.3

35.7

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

45.2

-0.3

2.1

40.4

Associated Gene:

Gene:

PTPN22

Ensembl Gene ID:

ENSAPLG00000011829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028662

5974771 - 5992444

17674

ENSAPLT00000017699

5975269 - 5992444

17176

ENSAPLT00000012347

5974771 - 5992444

17674