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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6002052_6002444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6002052 - 6002444

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCAGC

5'SS Class:

major

3'SS Sequence:

GGTTTCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTGGTTTCATT

Flanking Amino Acid:

PCTDSGNRGTESLISEGNQE

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

67.1

44.6

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

78.5

0.64

0.9

74.5

Minor 5ss

45.3

-0.5

2.7

61.2

43.3

Minor BPS

48.6

-0

2.2

74.65

43.4

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604