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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6002730_6003027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6002730 - 6003027

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCAATTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TCTCCTAAAACT

Flanking Amino Acid:

MLGRLLYHCIEEEKDMAVRD

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

78.3

32.5

Major BPS

72.7

0.57

72.1

31.1

Major PPT

70.6

0.46

0.9

61.2

38.8

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

50.8

0.1

42.9

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604