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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6003236_6003448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6003236 - 6003448

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

GTGGTTCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

GTAAGCATAGTA

Flanking Amino Acid:

SCEDTIQDSEGKQALIWLLG

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

55.5

0.14

1.4

40.9

Major PPT

74.3

0.55

70.3

41.3

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

-0.6

2.1

51.02

40.2

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604