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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6003553_6004511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6003553 - 6004511

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTTGTTTCATT

Flanking Amino Acid:

LGFQQEHITSAVVQAFRDLV

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

78.1

36.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.9

0.76

0.8

78.2

34.9

Minor 5ss

-0.7

2.9

60.8

43.8

Minor BPS

57.4

0.31

2.2

82.98

39.3

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604