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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6004596_6005272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6004596 - 6005272

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

TTGCCTTCTATG

Flanking Amino Acid:

ELAQGAISAIGNIARTYTEQ

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

0.27

1.2

55.4

41.7

Major PPT

73.6

0.53

66.1

40.8

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

45.8

-0.4

1.9

52.67

42.4

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604