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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6005417_6006685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6005417 - 6006685

Intron Length:

1269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGCTCATATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTCTGCTCATAT

Flanking Amino Acid:

VHELQGDAEVEPHYIKCQKM

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

79.7

0.74

79.6

35.6

Major PPT

73.3

0.52

70.3

39.4

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

45.9

-0.2

2.2

69.3

47.2

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604