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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6006817_6006893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6006817 - 6006893

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGCGCC

5'SS Class:

major

3'SS Sequence:

CCCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCGCCCCTGACG

Flanking Amino Acid:

GLALRSLCSLRVPGAQEYVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

39.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.4

0.8

29.2

Minor 5ss

31.1

-2.2

3.4

41.9

45.1

Minor BPS

47.5

-0.3

1.8

48.63

45.1

Associated Gene:

Gene:

AP4B1

Ensembl Gene ID:

ENSAPLG00000011577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033860

6000567 - 6007170

6604

ENSAPLT00000012073

6000567 - 6007170

6604