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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6010576_6010637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6010576 - 6010637

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

CCCGCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGCGCCCTCACG

Flanking Amino Acid:

EGAFGTILYTGDFRYASAMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

36.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

67.4

0.39

0.8

29.7

Minor 5ss

29.4

-2.4

3.6

41.9

45.1

Minor BPS

42.4

-0.7

2.2

44.1

47.5

Associated Gene:

Gene:

HIPK1

Ensembl Gene ID:

ENSAPLG00000011009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034240

6010171 - 6043358

33188

ENSAPLT00000025333

6010171 - 6043358

33188