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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6021235_6026284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6021235 - 6026284

Intron Length:

5050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGTTTTCAACA

Flanking Amino Acid:

CSTYLQSRYYRAPEIILGLP

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

100

1.24

0.5

100

Major PPT

80.7

0.69

0.9

77.7

35.5

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

66.1

0.5

1.5

74.78

37.2

Associated Gene:

Gene:

HIPK1

Ensembl Gene ID:

ENSAPLG00000011009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025333

6010171 - 6043358

33188

ENSAPLT00000011503

6013602 - 6043358

29757

ENSAPLT00000034240

6010171 - 6043358

33188

ENSAPLT00000030057

6010171 - 6043358

33188

ENSAPLT00000029783

6019746 - 6043358

23613