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Intron Name: Anas_platyrhynchos_platyrhynchos_27_602416_603787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

602416 - 603787

Intron Length:

1372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATGAC

U12 Branch Point Sequence:

CTTTGCCCACCA

Flanking Amino Acid:

EFATKEDLIQALLCSCFVPL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

62.2

0.3

1.2

53.6

41.6

Major PPT

77.5

0.62

0.7

73.7

24.6

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

-0.6

2.4

59.96

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042114

588119 - 607528

19410

ENSAPLT00000015291

601127 - 605600

4474

ENSAPLT00000042203

588119 - 605600

17482