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Intron Name: Anas_platyrhynchos_platyrhynchos_27_603854_604343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

603854 - 604343

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

GGTTCCTTCTTT

Flanking Amino Acid:

GFLPPLYHGVRYVDGELGMW

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

82.3

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

83.7

0.76

0.7

77.7

31.1

Minor 5ss

33.1

-1.9

2.7

40.7

39.2

Minor BPS

43.6

-0.4

3.6

73.38

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015291

601127 - 605600

4474

ENSAPLT00000042203

588119 - 605600

17482

ENSAPLT00000042114

588119 - 607528

19410