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Intron Name: Anas_platyrhynchos_platyrhynchos_27_604697_605196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

604697 - 605196

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TCTCTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAC

U12 Branch Point Sequence:

TGACCCATAACC

Flanking Amino Acid:

RDTVTFLKNLSLFGINYLAE

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

62.5

0.31

1.1

54.8

42.1

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

62.8

0.38

1.7

71.37

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042203

588119 - 605600

17482

ENSAPLT00000042114

588119 - 607528

19410

ENSAPLT00000015291

601127 - 605600

4474