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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6058606_6063664_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6058606 - 6063664

Intron Length:

5059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTCCCACC

Flanking Amino Acid:

LVEVKKSFKEWQGRAASFDS

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

36.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

78.1

0.63

0.8

71.5

34.3

Minor 5ss

36.7

-1.5

2.6

45.3

42.8

Minor BPS

48.2

-0.1

2.2

71.2

40.2

Associated Gene:

Gene:

SYT6

Ensembl Gene ID:

ENSAPLG00000010742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036945

6058534 - 6094642

36109

ENSAPLT00000011184

6058534 - 6088913

30380