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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6063816_6064479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6063816 - 6064479

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

GCTTTCCTATTT

Flanking Amino Acid:

SLLISVMDYDRVGHNEIIGV

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

90.6

0.91

0.7

89.2

27.2

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

49.1

0.02

1.9

68.65

42.7

Associated Gene:

Gene:

SYT6

Ensembl Gene ID:

ENSAPLG00000010742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036945

6058534 - 6094642

36109

ENSAPLT00000011184

6058534 - 6088913

30380