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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6064652_6065936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6064652 - 6065936

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

ATAAACAGAAGG

Flanking Amino Acid:

LKAMDITGYSDPYVKVSLLC

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

64.7

0.37

1.3

74.7

Major PPT

84.9

0.79

0.7

83.7

24.5

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

38.5

-1

43.02

41.1

Associated Gene:

Gene:

SYT6

Ensembl Gene ID:

ENSAPLG00000010742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036945

6058534 - 6094642

36109

ENSAPLT00000011184

6058534 - 6088913

30380