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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6066058_6071574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6066058 - 6071574

Intron Length:

5517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTCCAATATAA

Flanking Amino Acid:

IWKDIQYATAESVDLGEIMF

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

0.72

78.4

31.2

Major PPT

75.2

0.57

1.1

76.4

36.6

Minor 5ss

35.3

-1.7

2.9

46.6

41.8

Minor BPS

-0.3

2.1

65.01

40.3

Associated Gene:

Gene:

SYT6

Ensembl Gene ID:

ENSAPLG00000010742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036945

6058534 - 6094642

36109

ENSAPLT00000011184

6058534 - 6088913

30380