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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6074262_6088865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6074262 - 6088865

Intron Length:

14604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGCAG

U12 Branch Point Sequence:

CTCTTTTGGAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

37.4

-0.7

1.7

42.8

49.4

Major PPT

70.3

0.46

1.1

74.5

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

-0.5

1.6

46.91

40.6

Associated Gene:

Gene:

SYT6

Ensembl Gene ID:

ENSAPLG00000010742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011184

6058534 - 6088913

30380