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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6114332_6114622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6114332 - 6114622

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTGCTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTATAATGAATT

Flanking Amino Acid:

PSTSSTGSRGSCGSSGRTAE

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.8

0.49

0.9

62.8

43.6

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

53.1

0.18

1.9

76.59

39.3

Associated Gene:

Gene:

TRIM33

Ensembl Gene ID:

ENSAPLG00000010459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045400

6108384 - 6129388

21005

ENSAPLT00000038425

6109228 - 6129388

20161

ENSAPLT00000010950

6108384 - 6129388

21005