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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6114687_6115721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6114687 - 6115721

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTGTACTAAGT

Flanking Amino Acid:

GPSALSPGSSGLSNSHTPVR

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

37.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

32.4

-2

3.2

41.3

45.2

Minor BPS

46.4

-0.1

2.2

73.17

43.7

Associated Gene:

Gene:

TRIM33

Ensembl Gene ID:

ENSAPLG00000010459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045400

6108384 - 6129388

21005

ENSAPLT00000038425

6109228 - 6129388

20161

ENSAPLT00000010950

6108384 - 6129388

21005