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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6123489_6123744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6123489 - 6123744

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAA

U12 Branch Point Sequence:

ATAGTATAAAGC

Flanking Amino Acid:

VNFAAAQVQNRIKEVNETNK

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

60.9

0.27

1.3

64.3

39.6

Major PPT

88.5

0.87

0.6

88.4

21.3

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

-0.7

2.1

49.85

40.7

Associated Gene:

Gene:

TRIM33

Ensembl Gene ID:

ENSAPLG00000010459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038425

6109228 - 6129388

20161

ENSAPLT00000010950

6108384 - 6129388

21005

ENSAPLT00000045400

6108384 - 6129388

21005