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Intron Name: Anas_platyrhynchos_platyrhynchos_27_614777_617464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

614777 - 617464

Intron Length:

2688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGATGT

5'SS Class:

major

3'SS Sequence:

TTTTGCAGCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATCAG

U12 Branch Point Sequence:

TTGTTGGCAAAT

Flanking Amino Acid:

GGDNILSTVGRLPEDSYQVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.5

39.2

Major BPS

55.5

0.14

1.5

65.8

Major PPT

49.8

-0

1.7

58.8

41.8

Minor 5ss

32.8

-2

3.4

47.1

48.3

Minor BPS

39.9

-0.6

2.6

64.58

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015287

611947 - 618372

6426