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Intron Name: Anas_platyrhynchos_platyrhynchos_27_6148426_6148813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6148426 - 6148813

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAA

U12 Branch Point Sequence:

TTGACAATACAC

Flanking Amino Acid:

RRVIFVADNLSTLSKCGHAA

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

58.4

0.21

1.2

39.8

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

41.4

-0.6

2.1

54.86

42.4

Associated Gene:

Gene:

DENND2C

Ensembl Gene ID:

ENSAPLG00000010131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044797

6144511 - 6163760

19250

ENSAPLT00000010576

6144511 - 6164572

20062